# TXG-MAPr

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An R-Shiny-based implementation of weighted gene co-expression network
analysis (WGCNA) obtained from the Primary Human Hepatocytes (PHH)
TG-GATEs dataset.

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## Service

-   cloud: [https://txg-mapr.eu/](https://txg-mapr.eu/)
-   Login required: Yes
-   Implementation status:
-   TRL:
-   Type: -
-   Contact: Steven J. Kunnen
-   API Type:
-   Demo: [%demo.title%](%demo.url%)
-   Categories: -
-   Targeted users: -
-   Relevant VHP4Safety Use case: -

## Tool specifications

-   Provided by: Leiden University
-   Citation: <https://doi.org/10.1007/s00204-021-03141-w>
-   Version:
-   License: Proprietary
-   Source Code:
-   Docker:
-   Bio.tools: <https://bio.tools/TXG-MAPr>
-   TeSS:

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## Tool integration

-   [ ] Utilises the VHP4Safety APIs to ensure that each service is
    accessible to our proposed interoperability layer.
-   [ ] Is annotated according to the semantic interoperability layer
    concept using defined ontologies.
-   [ ] Is containerised for easy deployment in virtual environments of
    VHP4Safety instances.
-   [ ] Has documented scientific and technical background.
-   [ ] Is deployed into the VHP4Safety development environment.
-   [ ] Is deployed into the VHP4Safety production environment.
-   [ ] Is listed in the VHP4Safety discovery services.
-   [ ] Is listed in other central repositories like eInfraCentral,
    bio.tools and TeSS (ELIXIR).
-   [ ] Provides legal and ethical statements on how the service can be
    used.

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--->